Circadian Rhythm and Our Biological Clock

One of the wonders of the human body is the number of biological and physiological processes that oscillate throughout the day with no conscious input from ourselves.

When it comes to sleep, the circadian rhythm is one of these processes, operating in a predictable pattern based on environmental cues. It is why we feel tired or awake and alert at the times we do.

So how exactly does it work, what drives it, and what can disrupt it?
This guide will cover the circadian rhythm and the other biological processes that govern sleep in humans.

What Is Circadian Rhythm?


Circadian rhythm is a natural, internal system that governs biological and physiological processes that oscillate in a predictable pattern over the course of a day.

The circadian rhythm regulates the sleep-wake cycle and is endogenous but entrained by external environmental cues (zeitgebers) like light and temperature.

Your body’s circadian rhythm is what regulates internal changes within your brain and body over the course of a day, including sleep and wakefulness.

It is believed that organisms with circadian clocks gain an evolutionary advantage through extrinsic adaptive value (synchronizing behavior and physiological processes to cyclic environmental factors) and intrinsic adaptive value (coordinating internal metabolic processes).

Circadian is derived from the Latin word circa (“around” or “approximately”) and diem (“day”).

These rhythms are endogenous or “built-in” to our bodies. Still, they can also be influenced by outside stimuli, meaning that they are adjusted to the external environment through cues such as light and temperature.

The Body’s “Master Clock”

The master clock coordinates all the biological clocks of a living organism. In humans, the master clock is the Suprachiasmatic Nucleus (SCN), a small cluster of around 20,000 nerve cells located within the hypothalamus.

The SCN reacts to light, the predominant zeitgeber, or cue that entrains the circadian rhythm to synchronize with the light-dark cycle.

The SCN receives light signals from the eye. The light signals then travel from the hypothalamus to the pineal gland, which regulates the release of the hormones that make us sleepy or awake.

How Does the Circadian Rhythm Affect Our Sleep?

The change in levels of the sleep hormone melatonin during the sleep-wake cycle reflect circadian rhythms.

Exposure to light during the day triggers the production of hormones that promote wakefulness. As the light fades and disappears in the evening, this triggers the production of melatonin, a sleep-promoting hormone.

During the night, the body’s master clock continues sending signals that tell the body it is nighttime and continue sleeping.

Seasonal changes can affect our body’s circadian rhythm, impacting our sleep and level of tiredness — we may feel tired more often during the peak of winter when there’s less natural light, and the sun goes down earlier.

Is Circadian Rhythm the Same as a Biological Clock?

No. Circadian rhythms are produced and regulated by an organism’s biological clock. So, they are closely related, but not the same thing.

So, What is the Biological Clock in humans?

A biological clock is a collection of cells or molecules that regulate and coordinate the rhythm and timing of biological functions.

Sleep-Wake Homeostasis

Circadian rhythms and homeostasis are two interconnected mechanisms that your body utilizes to regulate sleep and wakefulness.

An easy way to distinguish the two is to look at them like this: homeostasis tracks your body’s need for sleep, and your body’s circadian rhythm is responsible for the timing of sleep.

It is sleep-wake homeostasis that tells us it is time for sleep — it’s what creates the sleep drive in humans.

Quite simply, it works like this: the longer we are awake, the stronger the desire or need for sleep becomes, and the longer we’ve been asleep, the more the need or pressure for sleep dissipates, meaning we’re more likely to wake up.

But it doesn’t quite work like that — if it were sleep-wake homeostasis on its own that dictated sleep, we would simply get more and more tired the longer we’re awake, and we’d likely nap in cycles during the day as the drive for sleep would build until we succumbed, then dissipate as we napped.

And, while as a general rule, sleep pressure builds the longer we are awake, it is our circadian rhythm that dictates how sleepy or awake we feel throughout the day — we have peaks and troughs of wakefulness and tiredness throughout the day.

The circadian rhythm allows us to overcome the drive for sleep and stay awake continuously for around 16 hours out of every day.

How to Maintain a Healthy Circadian Rhythm

While our circadian rhythm is out of our full control, maintaining healthy sleep habits is the best way to ensure it stays on track.

Following these guidelines will also allow you to reset your circadian rhythm if it does get disrupted:

  1. Natural light is the strongest circadian cue. Try to get regular exposure to natural light throughout the day. Getting a good dose of morning sunlight is especially beneficial.
  2. Practicing good sleep hygiene. Sleep hygiene refers to both the behaviors and the environmental conditions we create for ourselves around sleep.
    Some examples of good sleep hygiene that help to maintain a healthy circadian rhythm are:
    • Scheduling sleep — going to sleep and waking up at the same time every day.
    • Adhering to a pre-sleep routine. This involves the activities leading up to bed that act as a signal or cue that sleep time is approaching.
    • Maintaining a sleep-friendly bedroom. It should be comfortable and free of disruptions and distractions.
  3. The circadian rhythm takes time to develop. It usually takes 3-4 months for the circadian rhythm to become entrained in babies, which is why newborns and very young babies sleep throughout the entire day and not for long undisturbed periods.
  4. Daily exercise can make it easier to fall asleep at the end of the day.
  5. Try to avoid naps during the day. If a nap must be taken, try to make it as early in the day, as napping too late in the day can prevent you from falling asleep at the proper time at night.
  6. Avoid stimulants like caffeine and alcohol too close to bedtime. Stimulants can mess with your natural sleep-wake cycle, and you should try and avoid them from early afternoon onwards, even from about noon if you’re particularly sensitive.
  7. Avoid artificial light. Exposure to artificial light can disrupt your circadian rhythm, especially blue light, which can block the production of melatonin, the “sleep” hormone. Digital screens, fluorescent, and LED lighting are sources of blue light, so try and avoid them before bed.

How Does Circadian Rhythm Develop and Change With Age?

Our circadian rhythm is not constant throughout our life. It develops and undergoes changes with age, from birth into old age, and is partly responsible for the vastly different sleeping habits among humans in different life stages.

1Babies & Children

One way to think about the circadian rhythm in babies is that they come with the clock; it’s just not pre-programmed.

Even though they require 14-17 hours of sleep per day, newborn babies will not sleep in one block as adults do. Their sleep is sporadic and comes in a series of naps spread over 24 hours.

Babies sleep this way because their circadian rhythm has not yet become entrained — entrainment is the process that syncs the circadian rhythm with the light-dark cycle.

It takes until around three or four months of age for the circadian rhythm to become entrained in babies.

As children get older, the need for naps throughout the day diminishes, and their sleep begins to resemble that of adults, with sleep mirroring that of adults (i.e., one sleep block at night) around the ages of five to seven.

For everything you need to know about sleep in babies and children, you can read our Parents’ Guide to Children’s Sleep here.

an illustration of a baby with a clock beside


Our circadian rhythm changes as we age as adults, too.

As we age, we can become prone to desynchronization of our circadian rhythm, resulting in going to bed earlier and getting up earlier in the morning (phase advance). Sleep patterns can become irregular, and the requirement for daytime naps can often return.

Neurological changes may be to blame for our sleep changing as we age — our brain produces less growth hormone (which may increase deep sleep) and melatonin as we age.

Another factor that may account for changing circadian rhythms and sleep patterns as we age is changes in our daily activities. For example, post-retirement, often people’s days will suddenly become unstructured, meaning new routines and activities.

For more on seniors and sleep and how to ensure safe sleep as we age, see our guide on sleep and aging here.

illustration of a senior woman with a clock beside her

What Can Disrupt Our Circadian Rhythm?

There are external factors that are prevalent in modern life that can disrupt our natural circadian rhythm and sleep cycle:

  • Irregular and inconsistent mealtimes.
  • Exposure to light within an hour of bedtime (blue light from device screens is especially bad).
  • Light sources in the bedroom (lights from electronics, alarm clocks, streetlights, and other external lights).
  • Not being exposed to bright light upon waking in the morning.

On top of these everyday factors that are usually within our control, several circadian rhythm-related disorders can have an adverse effect, too:

1Jet Lag

If you’ve ever flown long-haul, then you may well have paid the price in the form of jet lag disrupting your sleep.

Jet lag is caused by crossing multiple time zones in a short period. Your body’s circadian rhythm is still synced to the time zone you left and is not yet synced to the time zone you ended up in. The more time zones you’ve crossed, the more out of sync your rhythm will be.

Luckily jet lag is temporary, and regular sleep will come with acclimatization to the new time zone.

an illustration of a woman suffering jet lag

2Shift Work Sleep Disorder

Shift work, by its very nature, forces people into unnatural sleep patterns. Shift Work Sleep Disorder (SWSD) affects people who work nontraditional or irregular hours that overlap with normal sleep time.

SWSD is characterized by insomnia and excessive sleepiness, and as a result, it can have long-term health consequences.

an illustration of a nurse

If you’re a shift worker whose sleep does not match up with your spouse or partner and you find your sleep disturbed by them coming or going to bed while you’re sleeping, then you may like to consider a mattress that’s quiet and minimizes or eliminates partner disturbance.

Take a look at OptimumSleep’s top-rated foam mattresses. Foam mattresses, in particular, perform well at isolating motion, and the right mattress pick can make all the difference when getting undisturbed sleep is essential to you and your partner.

3Advanced Sleep Phase Syndrome

Advanced Sleep Phase Disorder (ASPS) is a disorder where the sufferer’s circadian rhythm causes them to fall asleep earlier and wake up earlier than would be considered normal.

The cause is in the name — the internal sleep clock is out of phase with and advanced compared to clock time.

Sleep duration and quality will typically be the same; the body clock and circadian rhythm are just ahead of where they should be.

an illustration of a person waking up

4Delayed Sleep Phase Syndrome

Delayed Sleep Phase Syndrome (DSPS) is essentially the opposite of Advanced Sleep Phase Syndrome. It is characterized by a shift in the body’s internal clock and circadian rhythm that causes sufferers to go to sleep hours later and wake up hours later than is conventional or acceptable.

With both ASPS and DSPS, the body’s circadian rhythm is out of sync with external stimuli.

an illustration representing delayed sleep phase syndrome

5Non-24 Hour Sleep-Wake Rhythm Disorder

Non-24 hour sleep-wake rhythm disorder (Non-24) is a disorder common in, but not exclusive to, blind people. Non-24 is common in blind people because it is characterized by the body’s internal clock not synching with the 24-hour light-dark cycle.

Light not reaching the Suprachiasmatic Nucleus (SCN), which acts as one of the most significant external cues for generating the body’s circadian rhythm, is the reason why this disorder is so common in blind people.

an illustration representing non24 hour disorder

6Irregular Sleep-Wake Rhythm Disorder

Irregular Sleep-Wake Rhythm Disorder (ISWRD) is a circadian sleep disorder characterized by the absence of a circadian pattern in the sleep-wake cycle.

Sufferers of this disorder will still get the same total amount of sleep in a day, but without a “main” sleep episode, sleep happens in an irregular napping pattern across a 24-hour period.

ISWRD is usually caused by neurological disorders like dementia, brain damage, or intellectual disability.

an illustration of rolling dice

The Effects of a Disrupted Circadian Rhythm

There are health implications due to a disrupted circadian rhythm.

Chronic sleep deprivation can be one of the consequences of a disrupted circadian rhythm, and there are potentially serious, even life-shortening adverse health outcomes from a regular lack of sleep, including:

  • Adverse mental health effects — low mood, depression, anxiety, etc.
  • Immune deficiency
  • Hormone imbalances
  • Increased wrinkles, decreased skin elasticity, more prone to breakouts, and generally poor skin.
  • Increased appetite and junk food cravings, weight gain
  • Diminished memory, concentration, focus, alertness, and ability to learn
  • Diminished problem-solving skills, increased reaction time.
  • Increased risk of:
    • Raised blood pressure
    • Cardiovascular disease
    • Obesity
    • Type 2 diabetes
    • Chronic inflammation
    • Low testosterone and low sex drive